STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMABCorrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (329 aa)    
Predicted Functional Partners:
SETD1B
Histone-lysine N-methyltransferase SETD1B.
 
      0.704
EPRS
Bifunctional glutamate/proline--tRNA ligase.
     
 0.594
MUT
Methylmalonyl-CoA mutase, mitochondrial.
      
 0.550
Fam63a
Protein FAM63A.
      
 0.547
MMACHC
Methylmalonic aciduria and homocystinuria type C-like protein.
     
 0.542
MCEE
Methylmalonyl-CoA epimerase, mitochondrial.
     
 0.541
acsf3
Acyl-CoA synthetase family member 3, mitochondrial.
      
 0.505
tag-165
Putative methionine synthase reductase.
      
 0.491
Ppcdc
Phosphopantothenoylcysteine decarboxylase.
     
 0.489
MTR
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.470
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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