STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl3460S ribosomal protein L34. (117 aa)    
Predicted Functional Partners:
RpL32
60S ribosomal protein L32.
  
 0.995
RpL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.995
RpL13A
60S ribosomal protein L13a.
  
 0.994
rpl11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.994
RpL30
60S ribosomal protein L30.
   
 0.994
RpL8
60S ribosomal protein L8.
  
 0.994
RPL21
60S ribosomal protein L21.
   
 0.994
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.993
rpl-23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.993
RpL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.993
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.