STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xpo1Exportin-1. (1119 aa)    
Predicted Functional Partners:
Nup214
Nuclear pore complex protein.
    
 0.997
T01_2222
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.995
RGPD1
RANBP2-like and GRIP domain-containing protein 1.
   
 
 0.942
T01_6261
Nas2_N domain-containing protein.
   
 0.903
NUP98
Nuclear pore complex protein Nup98-Nup96.
    
 
 0.842
RANGAP1
Ran GTPase-activating protein 1.
   
 
 0.799
Nmd3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.771
cki-1
Cyclin-dependent kinase inhibitor 1.
    
 0.771
Nxf1
Nuclear RNA export factor 1.
    
 
 0.750
CSE1L
Exportin-2.
   
 
 0.747
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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