STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_11955Octopamine receptor; Belongs to the G-protein coupled receptor 1 family. (522 aa)    
Predicted Functional Partners:
T01_9399
Guanine nucleotide-binding protein G(S) subunit alpha.
    
 0.633
gpb-2
Guanine nucleotide-binding protein subunit beta-2.
    
 0.560
gpb-1
Guanine nucleotide-binding protein subunit beta-1.
    
 0.560
NepYr-2
Neuropeptide Y receptor; Belongs to the G-protein coupled receptor 1 family.
  
  
 0.524
gpa-7
Guanine nucleotide-binding protein alpha-7 subunit.
    
 0.470
T01_4123
Guanine nucleotide-binding protein G(I) subunit alpha.
    
 0.470
goa-1
Guanine nucleotide-binding protein G(O) subunit alpha.
    
 0.470
usp33
Ubiquitin carboxyl-terminal hydrolase 33.
    
  0.450
arr-1
Putative beta-arrestin.
   
 0.446
grk-2
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
   
 0.418
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.