STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T01_2179Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (241 aa)    
Predicted Functional Partners:
Phactr2
Phosphatase and actin regulator 2.
     
 0.564
apl-1
Beta-amyloid-like protein.
     
 0.546
Scarb2
Lysosome membrane protein 2; Belongs to the CD36 family.
   
 0.525
CD151
Tetraspanin.
    
 0.484
T01_16236
Uncharacterized protein.
   
 
 0.478
Tspan5
Tetraspanin.
    
 
 0.460
ITGB1
Integrin beta-1.
   
 0.450
pat-3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.450
ina-1
Integrin alpha ina-1; Belongs to the integrin alpha chain family.
   
 0.430
pat-2
Integrin alpha pat-2; Belongs to the integrin alpha chain family.
   
 0.430
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.