STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fhl2Four and a half LIM domains protein 2. (294 aa)    
Predicted Functional Partners:
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.647
Vangl1
Vang-like protein 1.
   
 0.578
unc-89-2
Muscle M-line assembly protein unc-89.
   
 
 0.529
GATA3
GATA-binding factor 3.
    
 0.528
T01_3905
Uncharacterized protein.
   
  
 0.492
LIMCH1
LIM and calponin homology domains-containing protein 1.
      
 0.471
Gata2
Endothelial transcription factor GATA-2.
   
 0.440
cpna-2
Copine family protein 2.
   
 
 0.409
unc-89-3
Muscle M-line assembly protein unc-89.
   
 
 0.400
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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