STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fmo5Dimethylaniline monooxygenase [N-oxide-forming]. (532 aa)    
Predicted Functional Partners:
RPS6KB1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.582
EEF1G
Elongation factor 1-gamma.
   
  
 0.545
CYP4V2
Cytochrome P450 4V2; Belongs to the cytochrome P450 family.
  
 
 0.530
Afmid
Kynurenine formamidase.
  
 
 0.516
PEO1-2
Twinkle protein, mitochondrial.
  
 
 0.515
LIPE
Hormone-sensitive lipase.
  
 
 0.514
coq6
Ubiquinone biosynthesis monooxygenase COQ6.
  
 0.488
T01_3432
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.471
ATPsyn-b
ATP synthase subunit b, mitochondrial.
   
   0.464
ATP5A1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.448
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
Server load: low (26%) [HD]