STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gfod1Glucose-fructose oxidoreductase domain-containing protein 1. (406 aa)    
Predicted Functional Partners:
NMNAT1
Nicotinamide mononucleotide adenylyltransferase 1.
  
 
 0.736
KARS
Lysine--tRNA ligase.
  
    0.665
NDUFA9
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial.
   
 
 0.625
Vars
Valine--tRNA ligase.
  
  
 0.615
Galk2
N-acetylgalactosamine kinase.
  
 
 0.592
Galk2-2
N-acetylgalactosamine kinase.
  
 
 0.592
Odc1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.553
Odc1-2
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.553
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
  
 
 0.546
fnbp1l
Formin-binding protein 1-like.
   
 
  0.546
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.