STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1r16aProtein phosphatase 1 regulatory subunit 16A. (692 aa)    
Predicted Functional Partners:
gpt2
Alanine aminotransferase 2.
 
 
 
 0.632
gsp-2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.601
gsp-2-2
Serine/threonine-protein phosphatase.
   
 0.601
flw
Serine/threonine-protein phosphatase.
   
 0.601
TOPP9
Serine/threonine-protein phosphatase.
   
 0.601
T01_3200
Serine/threonine-protein phosphatase.
   
 0.601
T01_6242
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.601
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.601
SAK
Serine/threonine-protein kinase PLK4.
    
 0.600
plk1
Serine/threonine-protein kinase PLK.
    
 0.600
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.