Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCDC101 | CECR2 | A0A0V1B8A5 | A0A0V1B7G3 | SAGA-associated factor 29-like protein. | Cat eye syndrome critical region protein 2. | 0.964 |
CCDC101 | Nipped-A | A0A0V1B8A5 | A0A0V1BCU0 | SAGA-associated factor 29-like protein. | Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family. | 0.968 |
CCDC101 | T01_2180 | A0A0V1B8A5 | A0A0V1B4N4 | SAGA-associated factor 29-like protein. | Uncharacterized protein. | 0.969 |
CCDC101 | TADA2B | A0A0V1B8A5 | A0A0V1BF29 | SAGA-associated factor 29-like protein. | Transcriptional adapter 2-beta. | 0.967 |
CCDC101 | Taf12 | A0A0V1B8A5 | A0A0V1BH69 | SAGA-associated factor 29-like protein. | Transcription initiation factor TFIID subunit 12. | 0.980 |
CCDC101 | Taf9b | A0A0V1B8A5 | A0A0V1BEA4 | SAGA-associated factor 29-like protein. | Transcription initiation factor TFIID subunit 9B. | 0.968 |
CCDC101 | eny2 | A0A0V1B8A5 | E5SSK2 | SAGA-associated factor 29-like protein. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.965 |
CCDC101 | taf6 | A0A0V1B8A5 | E5S0D1 | SAGA-associated factor 29-like protein. | Transcription initiation factor TFIID subunit 6. | 0.956 |
CCDC101 | usp30 | A0A0V1B8A5 | A0A0V1ASE9 | SAGA-associated factor 29-like protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.951 |
CECR2 | CCDC101 | A0A0V1B7G3 | A0A0V1B8A5 | Cat eye syndrome critical region protein 2. | SAGA-associated factor 29-like protein. | 0.964 |
CECR2 | Nipped-A | A0A0V1B7G3 | A0A0V1BCU0 | Cat eye syndrome critical region protein 2. | Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family. | 0.983 |
CECR2 | T01_2180 | A0A0V1B7G3 | A0A0V1B4N4 | Cat eye syndrome critical region protein 2. | Uncharacterized protein. | 0.987 |
CECR2 | TADA2B | A0A0V1B7G3 | A0A0V1BF29 | Cat eye syndrome critical region protein 2. | Transcriptional adapter 2-beta. | 0.987 |
CECR2 | Taf12 | A0A0V1B7G3 | A0A0V1BH69 | Cat eye syndrome critical region protein 2. | Transcription initiation factor TFIID subunit 12. | 0.953 |
CECR2 | Taf9b | A0A0V1B7G3 | A0A0V1BEA4 | Cat eye syndrome critical region protein 2. | Transcription initiation factor TFIID subunit 9B. | 0.983 |
CECR2 | eny2 | A0A0V1B7G3 | E5SSK2 | Cat eye syndrome critical region protein 2. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.953 |
CECR2 | taf6 | A0A0V1B7G3 | E5S0D1 | Cat eye syndrome critical region protein 2. | Transcription initiation factor TFIID subunit 6. | 0.953 |
CECR2 | usp30 | A0A0V1B7G3 | A0A0V1ASE9 | Cat eye syndrome critical region protein 2. | Ubiquitin carboxyl-terminal hydrolase. | 0.968 |
CETN1 | eny2 | A0A0V1BLU1 | E5SSK2 | Centrin-1. | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] | 0.935 |
Nipped-A | CCDC101 | A0A0V1BCU0 | A0A0V1B8A5 | Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family. | SAGA-associated factor 29-like protein. | 0.968 |
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