STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSTF2-3Cleavage stimulation factor subunit 2. (409 aa)    
Predicted Functional Partners:
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.978
Cstf3
Cleavage stimulation factor subunit 3.
   
 0.901
Fip1l1
Pre-mRNA 3'-end-processing factor FIP1.
   
 0.898
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.887
Clp
Cleavage and polyadenylation specificity factor subunit 4.
   
 0.886
Cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.875
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
    
 0.836
Papolg
Poly(A) polymerase gamma.
    
 0.831
WDR33
Pre-mRNA 3' end processing protein WDR33.
    
 0.826
T01_6765
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
   
 0.823
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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