Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH06891.1 | SDH06977.1 | SAMN05421869_101387 | SAMN05421869_101389 | DNA-binding transcriptional regulator, MarR family. | UbiD family decarboxylase; Belongs to the UbiD family. | 0.630 |
SDH06891.1 | SDH07024.1 | SAMN05421869_101387 | SAMN05421869_101390 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.547 |
SDH06891.1 | SDH07069.1 | SAMN05421869_101387 | SAMN05421869_101391 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.547 |
SDH06891.1 | SDH07110.1 | SAMN05421869_101387 | SAMN05421869_101392 | DNA-binding transcriptional regulator, MarR family. | Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family. | 0.533 |
SDH06891.1 | ubiX | SAMN05421869_101387 | SAMN05421869_101388 | DNA-binding transcriptional regulator, MarR family. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.620 |
SDH06977.1 | SDH06891.1 | SAMN05421869_101389 | SAMN05421869_101387 | UbiD family decarboxylase; Belongs to the UbiD family. | DNA-binding transcriptional regulator, MarR family. | 0.630 |
SDH06977.1 | SDH07024.1 | SAMN05421869_101389 | SAMN05421869_101390 | UbiD family decarboxylase; Belongs to the UbiD family. | Hypothetical protein. | 0.773 |
SDH06977.1 | SDH07069.1 | SAMN05421869_101389 | SAMN05421869_101391 | UbiD family decarboxylase; Belongs to the UbiD family. | Hypothetical protein. | 0.922 |
SDH06977.1 | SDH07110.1 | SAMN05421869_101389 | SAMN05421869_101392 | UbiD family decarboxylase; Belongs to the UbiD family. | Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family. | 0.773 |
SDH06977.1 | SDI14037.1 | SAMN05421869_101389 | SAMN05421869_104378 | UbiD family decarboxylase; Belongs to the UbiD family. | 4-hydroxybenzoate polyprenyltransferase. | 0.687 |
SDH06977.1 | ubiX | SAMN05421869_101389 | SAMN05421869_101388 | UbiD family decarboxylase; Belongs to the UbiD family. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.989 |
SDH06977.1 | ubiX-2 | SAMN05421869_101389 | SAMN05421869_10691 | UbiD family decarboxylase; Belongs to the UbiD family. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.959 |
SDH07024.1 | SDH06891.1 | SAMN05421869_101390 | SAMN05421869_101387 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.547 |
SDH07024.1 | SDH06977.1 | SAMN05421869_101390 | SAMN05421869_101389 | Hypothetical protein. | UbiD family decarboxylase; Belongs to the UbiD family. | 0.773 |
SDH07024.1 | SDH07069.1 | SAMN05421869_101390 | SAMN05421869_101391 | Hypothetical protein. | Hypothetical protein. | 0.922 |
SDH07024.1 | SDH07110.1 | SAMN05421869_101390 | SAMN05421869_101392 | Hypothetical protein. | Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family. | 0.773 |
SDH07024.1 | SDI14037.1 | SAMN05421869_101390 | SAMN05421869_104378 | Hypothetical protein. | 4-hydroxybenzoate polyprenyltransferase. | 0.687 |
SDH07024.1 | ubiX | SAMN05421869_101390 | SAMN05421869_101388 | Hypothetical protein. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.954 |
SDH07024.1 | ubiX-2 | SAMN05421869_101390 | SAMN05421869_10691 | Hypothetical protein. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.827 |
SDH07069.1 | SDH06891.1 | SAMN05421869_101391 | SAMN05421869_101387 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.547 |
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