Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH12705.1 | SDH16068.1 | SAMN05421869_101538 | SAMN05421869_101623 | Peroxiredoxin, Ohr subfamily. | CsbD-like. | 0.561 |
SDH12705.1 | SDH80951.1 | SAMN05421869_101538 | SAMN05421869_103305 | Peroxiredoxin, Ohr subfamily. | Transcriptional activator domain-containing protein. | 0.481 |
SDH12705.1 | SDM55158.1 | SAMN05421869_101538 | SAMN05421869_14715 | Peroxiredoxin, Ohr subfamily. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.826 |
SDH16068.1 | SDH12705.1 | SAMN05421869_101623 | SAMN05421869_101538 | CsbD-like. | Peroxiredoxin, Ohr subfamily. | 0.561 |
SDH16068.1 | SDH41417.1 | SAMN05421869_101623 | SAMN05421869_102218 | CsbD-like. | Osmotically inducible protein OsmC. | 0.561 |
SDH16068.1 | SDH80951.1 | SAMN05421869_101623 | SAMN05421869_103305 | CsbD-like. | Transcriptional activator domain-containing protein. | 0.677 |
SDH16068.1 | SDI83554.1 | SAMN05421869_101623 | SAMN05421869_107226 | CsbD-like. | PPOX class probable F420-dependent enzyme. | 0.557 |
SDH16068.1 | SDJ43580.1 | SAMN05421869_101623 | SAMN05421869_110249 | CsbD-like. | Hypothetical protein. | 0.557 |
SDH16068.1 | SDK86029.1 | SAMN05421869_101623 | SAMN05421869_119170 | CsbD-like. | Sulfofructosephosphate aldolase. | 0.683 |
SDH16068.1 | SDL00228.1 | SAMN05421869_101623 | SAMN05421869_12138 | CsbD-like. | Hypothetical protein. | 0.730 |
SDH16068.1 | SDM21974.1 | SAMN05421869_101623 | SAMN05421869_13874 | CsbD-like. | Pyridoxamine 5'-phosphate oxidase. | 0.607 |
SDH16068.1 | SDM55158.1 | SAMN05421869_101623 | SAMN05421869_14715 | CsbD-like. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.572 |
SDH16068.1 | SDM79449.1 | SAMN05421869_101623 | SAMN05421869_15620 | CsbD-like. | Teichoic acid transport system ATP-binding protein. | 0.608 |
SDH41417.1 | SDH16068.1 | SAMN05421869_102218 | SAMN05421869_101623 | Osmotically inducible protein OsmC. | CsbD-like. | 0.561 |
SDH41417.1 | SDH80951.1 | SAMN05421869_102218 | SAMN05421869_103305 | Osmotically inducible protein OsmC. | Transcriptional activator domain-containing protein. | 0.481 |
SDH41417.1 | SDM55158.1 | SAMN05421869_102218 | SAMN05421869_14715 | Osmotically inducible protein OsmC. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.792 |
SDH80951.1 | SDH12705.1 | SAMN05421869_103305 | SAMN05421869_101538 | Transcriptional activator domain-containing protein. | Peroxiredoxin, Ohr subfamily. | 0.481 |
SDH80951.1 | SDH16068.1 | SAMN05421869_103305 | SAMN05421869_101623 | Transcriptional activator domain-containing protein. | CsbD-like. | 0.677 |
SDH80951.1 | SDH41417.1 | SAMN05421869_103305 | SAMN05421869_102218 | Transcriptional activator domain-containing protein. | Osmotically inducible protein OsmC. | 0.481 |
SDH80951.1 | SDM55158.1 | SAMN05421869_103305 | SAMN05421869_14715 | Transcriptional activator domain-containing protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.776 |
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