STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH16370.14-hydroxy-4-methyl-2-oxoglutarate aldolase. (236 aa)    
Predicted Functional Partners:
SDH16332.1
4-oxalomesaconate hydratase.
 
  
 0.981
SDH16407.1
vanillate/3-O-methylgallate O-demethylase; Belongs to the GcvT family.
 
     0.897
SDM37289.1
4-oxalmesaconate hydratase.
 
  
 0.894
SDH16202.1
Protocatechuate 4,5-dioxygenase, beta chain.
 
   
 0.888
SDH16246.1
Protocatechuate 4,5-dioxygenase, alpha chain.
 
   
 0.880
SDL29781.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
 
  
 0.711
SDJ36972.1
2-Methylisocitrate lyase, PEP mutase family.
    
  0.699
SDI66847.1
N-acetylglucosaminyl deacetylase, LmbE family.
    
 0.653
SDH16114.1
Muconolactone D-isomerase; Belongs to the muconolactone Delta-isomerase family.
 
   
 0.635
SDH55057.1
P-hydroxybenzoate 3-monooxygenase.
 
     0.628
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.