STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG94110.1Sarcosine oxidase subunit alpha; Belongs to the GcvT family. (1105 aa)    
Predicted Functional Partners:
SDG94038.1
Sarcosine oxidase subunit beta.
 
     0.950
SDG94072.1
Sarcosine oxidase subunit delta.
 
     0.950
SDG93993.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
    
0.843
SDM69077.1
Rieske 2Fe-2S family protein.
  
     0.659
SDG94151.1
Protein of unknown function.
       0.557
SDG93917.1
Hypothetical protein.
       0.463
SDG93954.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.463
SDG93886.1
Hypothetical protein.
       0.432
SDJ64565.1
Glycine betaine/proline transport system substrate-binding protein.
  
     0.405
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.