Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG96778.1 | SDH54481.1 | SAMN05421869_101141 | SAMN05421869_102511 | DNA-binding transcriptional activator of the SARP family. | Phenylacetic acid degradation operon negative regulatory protein. | 0.638 |
SDG96778.1 | SDI61492.1 | SAMN05421869_101141 | SAMN05421869_106266 | DNA-binding transcriptional activator of the SARP family. | DNA-binding transcriptional regulator, HxlR family. | 0.491 |
SDG96778.1 | SDJ95806.1 | SAMN05421869_101141 | SAMN05421869_113121 | DNA-binding transcriptional activator of the SARP family. | DNA-binding transcriptional regulator, HxlR family. | 0.491 |
SDG96778.1 | SDL01489.1 | SAMN05421869_101141 | SAMN05421869_12175 | DNA-binding transcriptional activator of the SARP family. | NAD-dependent deacetylase. | 0.508 |
SDG96778.1 | SDM09988.1 | SAMN05421869_101141 | SAMN05421869_13619 | DNA-binding transcriptional activator of the SARP family. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.749 |
SDG96778.1 | SDM37955.1 | SAMN05421869_101141 | SAMN05421869_14239 | DNA-binding transcriptional activator of the SARP family. | DNA-binding transcriptional regulator, HxlR family. | 0.491 |
SDG96778.1 | cobB-2 | SAMN05421869_101141 | SAMN05421869_12168 | DNA-binding transcriptional activator of the SARP family. | NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.508 |
SDH54481.1 | SDG96778.1 | SAMN05421869_102511 | SAMN05421869_101141 | Phenylacetic acid degradation operon negative regulatory protein. | DNA-binding transcriptional activator of the SARP family. | 0.638 |
SDH54481.1 | SDH54527.1 | SAMN05421869_102511 | SAMN05421869_102512 | Phenylacetic acid degradation operon negative regulatory protein. | Acyl-CoA dehydrogenase. | 0.773 |
SDH54481.1 | SDI41012.1 | SAMN05421869_102511 | SAMN05421869_105350 | Phenylacetic acid degradation operon negative regulatory protein. | DNA-binding transcriptional activator of the SARP family. | 0.522 |
SDH54481.1 | SDI61492.1 | SAMN05421869_102511 | SAMN05421869_106266 | Phenylacetic acid degradation operon negative regulatory protein. | DNA-binding transcriptional regulator, HxlR family. | 0.626 |
SDH54481.1 | SDI96113.1 | SAMN05421869_102511 | SAMN05421869_10833 | Phenylacetic acid degradation operon negative regulatory protein. | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.533 |
SDH54481.1 | SDJ95806.1 | SAMN05421869_102511 | SAMN05421869_113121 | Phenylacetic acid degradation operon negative regulatory protein. | DNA-binding transcriptional regulator, HxlR family. | 0.626 |
SDH54481.1 | SDL01489.1 | SAMN05421869_102511 | SAMN05421869_12175 | Phenylacetic acid degradation operon negative regulatory protein. | NAD-dependent deacetylase. | 0.710 |
SDH54481.1 | SDM09988.1 | SAMN05421869_102511 | SAMN05421869_13619 | Phenylacetic acid degradation operon negative regulatory protein. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.728 |
SDH54481.1 | SDM37955.1 | SAMN05421869_102511 | SAMN05421869_14239 | Phenylacetic acid degradation operon negative regulatory protein. | DNA-binding transcriptional regulator, HxlR family. | 0.626 |
SDH54481.1 | cobB-2 | SAMN05421869_102511 | SAMN05421869_12168 | Phenylacetic acid degradation operon negative regulatory protein. | NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.710 |
SDH54527.1 | SDH54481.1 | SAMN05421869_102512 | SAMN05421869_102511 | Acyl-CoA dehydrogenase. | Phenylacetic acid degradation operon negative regulatory protein. | 0.773 |
SDI41012.1 | SDH54481.1 | SAMN05421869_105350 | SAMN05421869_102511 | DNA-binding transcriptional activator of the SARP family. | Phenylacetic acid degradation operon negative regulatory protein. | 0.522 |
SDI41012.1 | SDI61492.1 | SAMN05421869_105350 | SAMN05421869_106266 | DNA-binding transcriptional activator of the SARP family. | DNA-binding transcriptional regulator, HxlR family. | 0.491 |
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