STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH54481.1Phenylacetic acid degradation operon negative regulatory protein. (238 aa)    
Predicted Functional Partners:
SDH54527.1
Acyl-CoA dehydrogenase.
 
     0.773
SDM09988.1
Cell envelope-related function transcriptional attenuator common domain-containing protein.
   
    0.728
cobB-2
NAD-dependent protein deacetylase, SIR2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.710
SDL01489.1
NAD-dependent deacetylase.
   
    0.710
SDG96778.1
DNA-binding transcriptional activator of the SARP family.
  
    0.638
SDI61492.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.626
SDJ95806.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.626
SDM37955.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.626
SDI96113.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
   
    0.533
SDI41012.1
DNA-binding transcriptional activator of the SARP family.
   
    0.522
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
Server load: low (14%) [HD]