Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH54799.1 | SDH54842.1 | SAMN05421869_102518 | SAMN05421869_102519 | Glycine/D-amino acid oxidase. | Hypothetical protein. | 0.773 |
SDH54799.1 | SDH54885.1 | SAMN05421869_102518 | SAMN05421869_102520 | Glycine/D-amino acid oxidase. | Helix-turn-helix domain-containing protein. | 0.736 |
SDH54799.1 | SDH54925.1 | SAMN05421869_102518 | SAMN05421869_102521 | Glycine/D-amino acid oxidase. | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | 0.437 |
SDH54842.1 | SDH54799.1 | SAMN05421869_102519 | SAMN05421869_102518 | Hypothetical protein. | Glycine/D-amino acid oxidase. | 0.773 |
SDH54842.1 | SDH54885.1 | SAMN05421869_102519 | SAMN05421869_102520 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.651 |
SDH54842.1 | SDH54925.1 | SAMN05421869_102519 | SAMN05421869_102521 | Hypothetical protein. | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | 0.437 |
SDH54885.1 | SDH54799.1 | SAMN05421869_102520 | SAMN05421869_102518 | Helix-turn-helix domain-containing protein. | Glycine/D-amino acid oxidase. | 0.736 |
SDH54885.1 | SDH54842.1 | SAMN05421869_102520 | SAMN05421869_102519 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.651 |
SDH54885.1 | SDH54925.1 | SAMN05421869_102520 | SAMN05421869_102521 | Helix-turn-helix domain-containing protein. | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | 0.510 |
SDH54925.1 | SDH54799.1 | SAMN05421869_102521 | SAMN05421869_102518 | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | Glycine/D-amino acid oxidase. | 0.437 |
SDH54925.1 | SDH54842.1 | SAMN05421869_102521 | SAMN05421869_102519 | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | Hypothetical protein. | 0.437 |
SDH54925.1 | SDH54885.1 | SAMN05421869_102521 | SAMN05421869_102520 | Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains. | Helix-turn-helix domain-containing protein. | 0.510 |