STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH73925.1Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. (384 aa)    
Predicted Functional Partners:
SDH73895.1
Protein of unknown function.
 
   
 0.899
SDH74100.1
Hypothetical protein.
 
   
 0.844
SDH73955.1
Arabinofuranan 3-O-arabinosyltransferase.
 
   
 0.713
SDH77470.1
Extracellular solute-binding protein.
  
     0.538
SDH48454.1
Hypothetical protein.
  
     0.493
SDH79135.1
AhpC/TSA family protein.
  
     0.443
SDM44544.1
Hypothetical protein.
  
     0.430
SDH74132.1
PEP-CTERM protein-sorting domain-containing protein.
  
   
 0.429
SDJ00131.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.425
SDH88179.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.