STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH75847.1Putative hydrolase of the HAD superfamily. (239 aa)    
Predicted Functional Partners:
SDM55300.1
Polyphosphate glucokinase.
   
 
  0.836
SDI01285.1
Glucokinase.
   
 
  0.833
SDI88345.1
UTP--glucose-1-phosphate uridylyltransferase.
    
  0.825
SDL67004.1
Phosphoglucomutase.
  
 
  0.784
SDI15682.1
Glucokinase.
   
 
  0.781
SDI04712.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase.
    
 0.743
SDL49792.1
Starch phosphorylase.
  
 
 0.721
SDJ00972.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
     
 0.712
SDI66891.1
Glucose-1-phosphate cytidylyltransferase.
    
  0.709
SDL55029.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
 
 
  0.694
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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