STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH80205.1Glyoxylase, beta-lactamase superfamily II. (206 aa)    
Predicted Functional Partners:
SDH80243.1
S-(hydroxymethyl)mycothiol dehydrogenase.
 
     0.929
SDL68527.1
Glyoxylase, beta-lactamase superfamily II.
  
  
 
0.865
SDH04662.1
Glyoxylase I family protein.
    
  0.763
SDH80278.1
Adenylate cyclase.
       0.759
SDH80321.1
PH domain-containing protein.
       0.733
SDI76293.1
Adenylyltransferase and sulfurtransferase.
  
 0.632
SDH15397.1
Glyoxylase, beta-lactamase superfamily II.
  
  
  0.550
SDI19033.1
Amino acid adenylation domain-containing protein.
   
 0.549
SDL35828.1
Nonribosomal peptide synthetase protein VioO.
   
 0.533
fdhD-2
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.512
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.