STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI31783.1Helix-turn-helix domain-containing protein. (150 aa)    
Predicted Functional Partners:
SDI31820.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.824
SDK59481.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.773
SDJ56357.1
Helix-turn-helix domain-containing protein.
  
     0.730
SDM22615.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.710
SDJ56861.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.558
SDM05778.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.558
SDI31747.1
Predicted ATPase.
  
    0.550
SDI96431.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.540
SDL82889.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.506
SDI19582.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
    0.410
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.