STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI55044.1ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein. (347 aa)    
Predicted Functional Partners:
SDI55008.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.921
SDI54965.1
NitT/TauT family transport system permease protein.
 
 
  0.913
SDI55093.1
4-hydroxy-3-polyprenylbenzoate decarboxylase; Belongs to the UbiD family.
 
     0.851
ubiX-2
4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.788
SDI32581.1
Tetratricopeptide repeat-containing protein.
 
     0.769
SDJ04054.1
Hypothetical protein.
  
     0.767
SDL23226.1
Sulfonate transport system permease protein.
  
 
 0.748
SDL75526.1
Sulfonate transport system permease protein.
  
 
 0.748
SDL81451.1
Sulfonate transport system permease protein.
  
 
 0.748
SDL74316.1
TIGR02569 family protein.
  
     0.738
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.