STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI84141.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SDM82745.1
GDSL-like Lipase/Acylhydrolase family protein.
  
     0.587
SDM64621.1
FtsX-like permease family protein.
  
     0.559
SDI84182.1
Methyltransferase domain-containing protein.
       0.555
SDG95174.1
FtsX-like permease family protein.
  
     0.542
SDJ00972.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
 
  0.513
mfd
Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
  
    0.500
SDJ82725.1
Peptidase_C39 like family protein.
  
     0.488
SDH02251.1
Peptidase_C39 like family protein.
  
     0.486
SDI84023.1
XTP/dITP diphosphohydrolase.
    
  0.473
SDK62323.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.