STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI78178.1Predicted O-methyltransferase YrrM. (212 aa)    
Predicted Functional Partners:
SDI19033.1
Amino acid adenylation domain-containing protein.
  
 0.729
SDL35828.1
Nonribosomal peptide synthetase protein VioO.
  
 0.642
SDI78092.1
Putative zinc-finger.
       0.612
SDI78140.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.612
SDL08583.1
Acyl transferase domain-containing protein.
  
 
 0.559
SDL80669.1
Peptidase family U32.
  
  
 0.551
SDM80969.1
Amino acid adenylation domain-containing protein.
   
 0.450
SDM80776.1
Ketoacyl-synthetase C-terminal extension; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.450
SDI82443.1
Hypothetical protein.
   
    0.428
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.