Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDG93993.1 | SDI10733.1 | SAMN05421869_10173 | SAMN05421869_104297 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.992 |
| SDG93993.1 | SDI19033.1 | SAMN05421869_10173 | SAMN05421869_104510 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Amino acid adenylation domain-containing protein. | 0.932 |
| SDG93993.1 | SDJ06346.1 | SAMN05421869_10173 | SAMN05421869_108310 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.628 |
| SDG93993.1 | SDL08583.1 | SAMN05421869_10173 | SAMN05421869_1226 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Acyl transferase domain-containing protein. | 0.752 |
| SDG93993.1 | SDL08752.1 | SAMN05421869_10173 | SAMN05421869_12212 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Methylaspartate mutase epsilon subunit. | 0.724 |
| SDG93993.1 | SDL35828.1 | SAMN05421869_10173 | SAMN05421869_12514 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Nonribosomal peptide synthetase protein VioO. | 0.855 |
| SDG93993.1 | SDL53825.1 | SAMN05421869_10173 | SAMN05421869_1279 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Pimaricinolide synthase PimS1. | 0.724 |
| SDG93993.1 | SDM80598.1 | SAMN05421869_10173 | SAMN05421869_1571 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Amino acid adenylation domain-containing protein. | 0.786 |
| SDG93993.1 | gcvP | SAMN05421869_10173 | SAMN05421869_105235 | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.997 |
| SDI10733.1 | SDG93993.1 | SAMN05421869_104297 | SAMN05421869_10173 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.992 |
| SDI10733.1 | SDI19033.1 | SAMN05421869_104297 | SAMN05421869_104510 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Amino acid adenylation domain-containing protein. | 0.932 |
| SDI10733.1 | SDJ06346.1 | SAMN05421869_104297 | SAMN05421869_108310 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.628 |
| SDI10733.1 | SDL08583.1 | SAMN05421869_104297 | SAMN05421869_1226 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Acyl transferase domain-containing protein. | 0.752 |
| SDI10733.1 | SDL08752.1 | SAMN05421869_104297 | SAMN05421869_12212 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Methylaspartate mutase epsilon subunit. | 0.724 |
| SDI10733.1 | SDL35828.1 | SAMN05421869_104297 | SAMN05421869_12514 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Nonribosomal peptide synthetase protein VioO. | 0.855 |
| SDI10733.1 | SDL53825.1 | SAMN05421869_104297 | SAMN05421869_1279 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Pimaricinolide synthase PimS1. | 0.724 |
| SDI10733.1 | SDM80598.1 | SAMN05421869_104297 | SAMN05421869_1571 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Amino acid adenylation domain-containing protein. | 0.786 |
| SDI10733.1 | gcvP | SAMN05421869_104297 | SAMN05421869_105235 | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.997 |
| SDI19033.1 | SDG93993.1 | SAMN05421869_104510 | SAMN05421869_10173 | Amino acid adenylation domain-containing protein. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.932 |
| SDI19033.1 | SDI10733.1 | SAMN05421869_104510 | SAMN05421869_104297 | Amino acid adenylation domain-containing protein. | 4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family. | 0.932 |
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