Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH71144.1 | SDJ64436.1 | SAMN05421869_10340 | SAMN05421869_111299 | TetR/AcrR family transcriptional regulator, tetracycline repressor protein. | Regulatory protein, tetR family. | 0.628 |
SDH71144.1 | SDK13164.1 | SAMN05421869_10340 | SAMN05421869_11439 | TetR/AcrR family transcriptional regulator, tetracycline repressor protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.419 |
SDI28877.1 | SDJ64436.1 | SAMN05421869_10549 | SAMN05421869_111299 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Regulatory protein, tetR family. | 0.428 |
SDJ64399.1 | SDJ64436.1 | SAMN05421869_111298 | SAMN05421869_111299 | Hypothetical protein. | Regulatory protein, tetR family. | 0.546 |
SDJ64436.1 | SDH71144.1 | SAMN05421869_111299 | SAMN05421869_10340 | Regulatory protein, tetR family. | TetR/AcrR family transcriptional regulator, tetracycline repressor protein. | 0.628 |
SDJ64436.1 | SDI28877.1 | SAMN05421869_111299 | SAMN05421869_10549 | Regulatory protein, tetR family. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.428 |
SDJ64436.1 | SDJ64399.1 | SAMN05421869_111299 | SAMN05421869_111298 | Regulatory protein, tetR family. | Hypothetical protein. | 0.546 |
SDJ64436.1 | SDK13164.1 | SAMN05421869_111299 | SAMN05421869_11439 | Regulatory protein, tetR family. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.419 |
SDK13164.1 | SDH71144.1 | SAMN05421869_11439 | SAMN05421869_10340 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | TetR/AcrR family transcriptional regulator, tetracycline repressor protein. | 0.419 |
SDK13164.1 | SDJ64436.1 | SAMN05421869_11439 | SAMN05421869_111299 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Regulatory protein, tetR family. | 0.419 |