STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK13541.1Protein of unknown function. (208 aa)    
Predicted Functional Partners:
SDL46990.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.947
SDI03078.1
Serine/threonine protein kinase.
 
 
 
 0.933
SDL45581.1
Serine/threonine protein kinase.
 
 
 
 0.932
SDM10292.1
Serine/threonine protein kinase.
 
 
 
 0.932
SDM45503.1
Serine/threonine protein kinase.
 
 
 
 0.930
SDI08822.1
Glutamate synthase (NADPH/NADH) large chain.
    
   0.872
SDM81966.1
Hypothetical protein.
   
 0.831
SDL10355.1
Hypothetical protein.
  
 
 0.817
SDM52424.1
PAS domain S-box-containing protein.
 
 
 0.816
SDL96196.1
PAS domain S-box-containing protein.
  
 
 0.811
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.