STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK79698.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (296 aa)    
Predicted Functional Partners:
SDI19033.1
Amino acid adenylation domain-containing protein.
  
 
 0.736
SDL35828.1
Nonribosomal peptide synthetase protein VioO.
  
 
 0.736
SDK79650.1
SnoaL-like domain-containing protein.
 
     0.734
SDL08583.1
Acyl transferase domain-containing protein.
  
 
 0.733
SDL08752.1
Methylaspartate mutase epsilon subunit.
  
 
 0.708
SDL53825.1
Pimaricinolide synthase PimS1.
  
 
 0.708
SDK79744.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
    
0.703
SDH44209.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.611
SDH36576.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.607
SDJ07456.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.566
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.