STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK94080.1Cobaltochelatase CobN. (1231 aa)    
Predicted Functional Partners:
SDK93994.1
cob(I)alamin adenosyltransferase.
 
  
 0.991
SDK93912.1
Magnesium chelatase subunit D.
 
 0.990
cobB
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
 
 0.989
SDK94315.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.962
SDK94237.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
   
 0.947
SDK94203.1
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase.
 
  
 0.946
SDJ13953.1
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase.
 
  
 0.942
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
   
 0.930
SDK94164.1
precorrin-8X/cobalt-precorrin-8 methylmutase.
 
  
 0.923
SDK94282.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
   
 0.913
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.