STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK90016.1Uncharacterized conserved protein PhnB, glyoxalase superfamily. (136 aa)    
Predicted Functional Partners:
SDK90056.1
AraC-type DNA-binding protein.
 
    0.953
SDL31633.1
AraC-type DNA-binding protein.
 
    0.793
SDJ00972.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
   
    0.772
SDK13742.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.617
SDK90094.1
Membrane-associated protease RseP, regulator of RpoE activity.
       0.555
SDJ74926.1
Rhodanese-related sulfurtransferase.
  
 
  0.545
SDJ74572.1
Catechol 2,3-dioxygenase.
 
 
  0.540
SDJ77717.1
Aldo/keto reductase.
  
 
  0.454
SDK71912.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
 
  0.443
SDI88516.1
Hypothetical protein.
 
 
  0.434
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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