Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI08822.1 | SDK21247.1 | SAMN05421869_104250 | SAMN05421869_114248 | Glutamate synthase (NADPH/NADH) large chain. | AraC-type DNA-binding protein. | 0.659 |
SDI08822.1 | SDK90942.1 | SAMN05421869_104250 | SAMN05421869_12049 | Glutamate synthase (NADPH/NADH) large chain. | AraC-type DNA-binding protein. | 0.659 |
SDI08822.1 | SDL10355.1 | SAMN05421869_104250 | SAMN05421869_12256 | Glutamate synthase (NADPH/NADH) large chain. | Hypothetical protein. | 0.818 |
SDI08822.1 | SDL47878.1 | SAMN05421869_104250 | SAMN05421869_12687 | Glutamate synthase (NADPH/NADH) large chain. | AraC-type DNA-binding protein. | 0.659 |
SDI08822.1 | SDL73371.1 | SAMN05421869_104250 | SAMN05421869_1307 | Glutamate synthase (NADPH/NADH) large chain. | AraC-type DNA-binding protein. | 0.659 |
SDI08822.1 | rpoA | SAMN05421869_104250 | SAMN05421869_103559 | Glutamate synthase (NADPH/NADH) large chain. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.535 |
SDK21247.1 | SDI08822.1 | SAMN05421869_114248 | SAMN05421869_104250 | AraC-type DNA-binding protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.659 |
SDK21247.1 | SDK90942.1 | SAMN05421869_114248 | SAMN05421869_12049 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.692 |
SDK21247.1 | SDL10355.1 | SAMN05421869_114248 | SAMN05421869_12256 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.521 |
SDK21247.1 | ribBA | SAMN05421869_114248 | SAMN05421869_104141 | AraC-type DNA-binding protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.552 |
SDK21247.1 | rpoA | SAMN05421869_114248 | SAMN05421869_103559 | AraC-type DNA-binding protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.454 |
SDK90913.1 | SDK90942.1 | SAMN05421869_12048 | SAMN05421869_12049 | Prolyl oligopeptidase. | AraC-type DNA-binding protein. | 0.770 |
SDK90913.1 | SDK90973.1 | SAMN05421869_12048 | SAMN05421869_12050 | Prolyl oligopeptidase. | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.757 |
SDK90913.1 | SDK91006.1 | SAMN05421869_12048 | SAMN05421869_12051 | Prolyl oligopeptidase. | Cupin domain-containing protein. | 0.757 |
SDK90942.1 | SDI08822.1 | SAMN05421869_12049 | SAMN05421869_104250 | AraC-type DNA-binding protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.659 |
SDK90942.1 | SDK21247.1 | SAMN05421869_12049 | SAMN05421869_114248 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.692 |
SDK90942.1 | SDK90913.1 | SAMN05421869_12049 | SAMN05421869_12048 | AraC-type DNA-binding protein. | Prolyl oligopeptidase. | 0.770 |
SDK90942.1 | SDK90973.1 | SAMN05421869_12049 | SAMN05421869_12050 | AraC-type DNA-binding protein. | Uncharacterized conserved protein PhnB, glyoxalase superfamily. | 0.888 |
SDK90942.1 | SDK91006.1 | SAMN05421869_12049 | SAMN05421869_12051 | AraC-type DNA-binding protein. | Cupin domain-containing protein. | 0.826 |
SDK90942.1 | SDL10355.1 | SAMN05421869_12049 | SAMN05421869_12256 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.521 |
page 1 of 3