STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL69304.1Endonuclease, Uma2 family (restriction endonuclease fold). (197 aa)    
Predicted Functional Partners:
SDL69331.1
Hypothetical protein.
 
     0.689
SDM55194.1
Endonuclease, Uma2 family (restriction endonuclease fold).
  
     0.654
SDJ18805.1
Transposase.
  
     0.545
SDJ18728.1
DDE superfamily endonuclease.
  
     0.542
SDL49447.1
Hypothetical protein.
  
     0.464
SDH08470.1
Snapalysin.
  
     0.436
SDH50240.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.