STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL70267.1Formate-dependent nitrite reductase, membrane component NrfD. (333 aa)    
Predicted Functional Partners:
SDL70304.1
Formate dehydrogenase iron-sulfur subunit.
 
 
 0.975
SDL70349.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.951
SDJ25833.1
Formate dehydrogenase iron-sulfur subunit.
 
 
 0.896
SDJ25870.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.792
SDL70378.1
Rhamnulokinase.
       0.559
SDL70415.1
Transcriptional regulator, LacI family.
       0.559
SDL70199.1
Protein of unknown function.
       0.516
SDI00240.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
    
 0.508
SDI53340.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
  0.412
SDK71426.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
  0.412
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.