STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM58849.1LAO/AO transport system kinase. (346 aa)    
Predicted Functional Partners:
SDJ82354.1
methylmalonyl-CoA mutase.
  
 0.970
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
  
0.891
SDJ82412.1
methylmalonyl-CoA mutase.
 
  
 0.835
SDJ61609.1
methylmalonyl-CoA epimerase.
 
     0.791
SDH80567.1
propionyl-CoA carboxylase beta chain.
 
     0.753
SDI17604.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
     0.749
SDL08790.1
Methylaspartate mutase sigma subunit.
  
  
 0.544
SDK92007.1
methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
 
     0.540
SDJ61008.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
 
     0.485
SDI65729.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
  
 0.410
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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