Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM76505.1 | SDM76546.1 | SAMN05421869_1552 | SAMN05421869_1553 | NADH dehydrogenase. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.809 |
SDM76505.1 | SDM76595.1 | SAMN05421869_1552 | SAMN05421869_1554 | NADH dehydrogenase. | Methyltransferase domain-containing protein. | 0.495 |
SDM76505.1 | SDM76643.1 | SAMN05421869_1552 | SAMN05421869_1555 | NADH dehydrogenase. | Hypothetical protein. | 0.429 |
SDM76505.1 | SDM76683.1 | SAMN05421869_1552 | SAMN05421869_1556 | NADH dehydrogenase. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.429 |
SDM76546.1 | SDM76505.1 | SAMN05421869_1553 | SAMN05421869_1552 | Ubiquinol-cytochrome c reductase cytochrome b subunit. | NADH dehydrogenase. | 0.809 |
SDM76546.1 | SDM76595.1 | SAMN05421869_1553 | SAMN05421869_1554 | Ubiquinol-cytochrome c reductase cytochrome b subunit. | Methyltransferase domain-containing protein. | 0.485 |
SDM76546.1 | SDM76643.1 | SAMN05421869_1553 | SAMN05421869_1555 | Ubiquinol-cytochrome c reductase cytochrome b subunit. | Hypothetical protein. | 0.429 |
SDM76546.1 | SDM76683.1 | SAMN05421869_1553 | SAMN05421869_1556 | Ubiquinol-cytochrome c reductase cytochrome b subunit. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.429 |
SDM76595.1 | SDM76505.1 | SAMN05421869_1554 | SAMN05421869_1552 | Methyltransferase domain-containing protein. | NADH dehydrogenase. | 0.495 |
SDM76595.1 | SDM76546.1 | SAMN05421869_1554 | SAMN05421869_1553 | Methyltransferase domain-containing protein. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.485 |
SDM76595.1 | SDM76643.1 | SAMN05421869_1554 | SAMN05421869_1555 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.671 |
SDM76595.1 | SDM76683.1 | SAMN05421869_1554 | SAMN05421869_1556 | Methyltransferase domain-containing protein. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.671 |
SDM76595.1 | SDM76721.1 | SAMN05421869_1554 | SAMN05421869_1557 | Methyltransferase domain-containing protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.473 |
SDM76643.1 | SDM76505.1 | SAMN05421869_1555 | SAMN05421869_1552 | Hypothetical protein. | NADH dehydrogenase. | 0.429 |
SDM76643.1 | SDM76546.1 | SAMN05421869_1555 | SAMN05421869_1553 | Hypothetical protein. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.429 |
SDM76643.1 | SDM76595.1 | SAMN05421869_1555 | SAMN05421869_1554 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.671 |
SDM76643.1 | SDM76683.1 | SAMN05421869_1555 | SAMN05421869_1556 | Hypothetical protein. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
SDM76643.1 | SDM76721.1 | SAMN05421869_1555 | SAMN05421869_1557 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.538 |
SDM76683.1 | SDM76505.1 | SAMN05421869_1556 | SAMN05421869_1552 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | NADH dehydrogenase. | 0.429 |
SDM76683.1 | SDM76546.1 | SAMN05421869_1556 | SAMN05421869_1553 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Ubiquinol-cytochrome c reductase cytochrome b subunit. | 0.429 |
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