STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM79032.1Type VII secretion-associated serine protease mycosin. (375 aa)    
Predicted Functional Partners:
SDM78981.1
Hypothetical protein.
       0.789
SDM79077.1
Hypothetical protein.
       0.699
SDM79126.1
Acetyl-CoA acetyltransferase.
       0.699
SDH81379.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.652
SDH82248.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.652
SDM78934.1
Hypothetical protein.
       0.527
SDH88538.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 
 
0.504
SDH33124.1
Peptidase inhibitor I9.
  
  
  0.458
SDI66109.1
Hypothetical protein.
    
  0.450
SDL94937.1
Hypothetical protein.
    
  0.450
Your Current Organism:
Nonomuraea jiangxiensis
NCBI taxonomy Id: 633440
Other names: CGMCC 4.6533, N. jiangxiensis, NBRC 106679, Nonomuraea jiangxiensis Li et al. 2012, Nonomuraea sp. FXJ1.102, strain FXJ1.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.