Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH35236.1 | SDM83615.1 | SAMN05421869_10289 | SAMN05421869_1597 | Cupin domain-containing protein. | Phenazine biosynthesis protein PhzF family. | 0.438 |
SDK72685.1 | SDM83615.1 | SAMN05421869_11879 | SAMN05421869_1597 | Phenazine biosynthesis protein PhzF family. | Phenazine biosynthesis protein PhzF family. | 0.486 |
SDM74428.1 | SDM83615.1 | SAMN05421869_15414 | SAMN05421869_1597 | Cupin domain-containing protein. | Phenazine biosynthesis protein PhzF family. | 0.472 |
SDM83615.1 | SDH35236.1 | SAMN05421869_1597 | SAMN05421869_10289 | Phenazine biosynthesis protein PhzF family. | Cupin domain-containing protein. | 0.438 |
SDM83615.1 | SDK72685.1 | SAMN05421869_1597 | SAMN05421869_11879 | Phenazine biosynthesis protein PhzF family. | Phenazine biosynthesis protein PhzF family. | 0.486 |
SDM83615.1 | SDM74428.1 | SAMN05421869_1597 | SAMN05421869_15414 | Phenazine biosynthesis protein PhzF family. | Cupin domain-containing protein. | 0.472 |
SDM83615.1 | SDM83652.1 | SAMN05421869_1597 | SAMN05421869_1598 | Phenazine biosynthesis protein PhzF family. | 2OG-Fe(II) oxygenase superfamily protein. | 0.655 |
SDM83615.1 | SDM83699.1 | SAMN05421869_1597 | SAMN05421869_1599 | Phenazine biosynthesis protein PhzF family. | Hypothetical protein. | 0.430 |
SDM83652.1 | SDM83615.1 | SAMN05421869_1598 | SAMN05421869_1597 | 2OG-Fe(II) oxygenase superfamily protein. | Phenazine biosynthesis protein PhzF family. | 0.655 |
SDM83652.1 | SDM83699.1 | SAMN05421869_1598 | SAMN05421869_1599 | 2OG-Fe(II) oxygenase superfamily protein. | Hypothetical protein. | 0.565 |
SDM83699.1 | SDM83615.1 | SAMN05421869_1599 | SAMN05421869_1597 | Hypothetical protein. | Phenazine biosynthesis protein PhzF family. | 0.430 |
SDM83699.1 | SDM83652.1 | SAMN05421869_1599 | SAMN05421869_1598 | Hypothetical protein. | 2OG-Fe(II) oxygenase superfamily protein. | 0.565 |