STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T02_15294Uncharacterized protein. (878 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia group M protein.
    
 0.700
lin-54
Protein lin-54.
    
 0.599
lin-9
Protein lin-9.
    
 0.518
Dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
 0.514
Rpa2
Replication protein A 32 kDa subunit.
    
 0.507
Rbl1
Retinoblastoma-like protein 1.
    
  0.498
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.448
DYN2
Transcription factor Dp-1.
    
  0.447
sas6
Spindle assembly abnormal protein 6-like protein.
    
  0.437
apitd1
Centromere protein S.
    
  0.433
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.