STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ube2wUbiquitin-conjugating enzyme E2 W. (150 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.999
trip12
E3 ubiquitin-protein ligase TRIP12.
    
 0.936
UBA1
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.911
FANCM
Fanconi anemia group M protein.
    
 0.894
UBA52
Ubiquitin-60S ribosomal protein L40.
   
 0.870
Ube2h
Protein Dok-7.
   
 0.861
Ube2j2
Ubiquitin-conjugating enzyme E2 J2.
    
0.861
Uba3
Tyrosine--tRNA ligase.
   
 0.842
T02_422
Ubiquitin-like modifier-activating enzyme 5.
   
 0.834
UBXN7
UBX domain-containing protein 7.
   
 0.823
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.