STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM6ALysine-specific demethylase 6A. (1612 aa)    
Predicted Functional Partners:
T02_6839
Histone H3.2.
   
 0.999
FIE
Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM.
    
 0.999
T02_14644
Histone H3.
   
 0.999
E(z)
Histone-lysine N-methyltransferase E(Z).
  
 0.999
cenpa
Histone H3-like centromeric protein A.
   
 0.999
ASH2L
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.999
D917_09437
Histone H3; Belongs to the histone H3 family.
   
 0.999
RBBP5
Retinoblastoma-binding protein 5.
    
 0.999
HHT3
Histone H3; Belongs to the histone H3 family.
   
 0.999
leo1
RNA polymerase-associated protein LEO1.
    
 0.998
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.