STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T02_12055Protein cramped-like. (617 aa)    
Predicted Functional Partners:
RUNX1
Runt-related transcription factor 1.
   
 0.743
bs
Serum response factor-like protein.
    
 0.655
C05D10.2
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.638
mapk14
Mitogen-activated protein kinase.
    
 0.638
MAPK1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.638
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.614
EHF
ETS homologous factor.
    
 0.601
TONSL
Tonsoku-like protein.
    
 0.558
PBDC1
Caskin-2.
    
 0.558
T02_12582
Tetratricopeptide repeat protein 14.
    
  0.553
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.