STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PcPolycomb group protein Pc. (290 aa)    
Predicted Functional Partners:
Psc
Polycomb group protein Psc.
    
 0.952
CD109
Antigen-like protein.
    
 0.877
E(z)
Histone-lysine N-methyltransferase E(Z).
    
 0.824
CBX2
Chromobox-like protein 2.
  
 
0.804
FIE
Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM.
    
 0.791
PcgF3
Polycomb group RING finger protein 3.
    
 0.773
Yaf2
Zn-finger in Ran binding protein.
    
 0.765
T02_7973
PNT domain-containing protein.
    
 0.749
SFMBT2
Scm-like with four MBT domains protein 2.
   
 0.744
Sfmbt2-21
Scm-like with four MBT domains protein 2.
   
 0.744
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.