STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc16a9Monocarboxylate transporter 9. (642 aa)    
Predicted Functional Partners:
GTF3C5-2
General transcription factor 3C polypeptide 5.
    
 
 0.508
GTF3C3
General transcription factor 3C polypeptide 3.
    
 
 0.497
SLCO5A1-2
Solute carrier organic anion transporter family member 5A1.
   
 
 0.437
T02_2130
Solute carrier organic anion transporter family member.
   
 
 0.437
Slco2b1
Solute carrier organic anion transporter family member 2B1.
   
 
 0.437
Slco4a1
Solute carrier organic anion transporter family member.
   
 
 0.437
Slco4a1-2
Solute carrier organic anion transporter family member.
   
 
 0.437
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.