STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
O-fut1GDP-fucose protein O-fucosyltransferase 1. (479 aa)    
Predicted Functional Partners:
pad-2
GDP-fucose protein O-fucosyltransferase 2.
     
 0.922
POGLUT1
Protein O-glucosyltransferase 1.
   
 
 0.690
KDELC2
KDEL motif-containing protein 2.
   
 
 0.518
fng
Fringe glycosyltransferase.
      
 0.477
NDUFAF2
EGF domain-specific O-linked N-acetylglucosamine transferase.
      
 0.461
FUT8
Alpha-(1,6)-fucosyltransferase; Belongs to the glycosyltransferase 23 family.
      
 0.461
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.