STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAFAH1B2Platelet-activating factor acetylhydrolase IB subunit beta. (256 aa)    
Predicted Functional Partners:
POP1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
    
 0.988
PLA2G7
Platelet-activating factor acetylhydrolase.
     
 0.810
Lpcat1
Lysophosphatidylcholine acyltransferase 1.
     
 0.808
Pla2g12a
Group XIIA secretory phospholipase A2.
     
 0.803
T02_14368
Trehalose-phosphatase.
    
  0.799
MFSD10
Glycerol-3-phosphate acyltransferase 3.
     
 0.547
T02_5432
Acidic phospholipase-like protein.
     
 0.546
mgrn1
Putative E3 ubiquitin-protein ligase MGRN1.
   
 
 0.454
chmp7
Charged multivesicular body protein 7.
    
   0.412
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.