STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRICKLE1Prickle-like protein 1. (986 aa)    
Predicted Functional Partners:
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.963
Vangl1
Vang-like protein 1.
    
 0.959
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.788
Nfkb1
Nuclear factor NF-kappa-B subunit.
    
 0.761
Psmd3
26S proteasome non-ATPase regulatory subunit 3.
    
  0.704
stan
Protocadherin-like wing polarity protein stan; Belongs to the G-protein coupled receptor 2 family.
   
 0.700
WWC2
Protein WWC2.
    
 0.687
Tanc2
Protein TANC2.
   
 0.683
ANK1
Ankyrin-1; Belongs to the transient receptor (TC 1.A.4) family.
   
 0.683
ANKRD50
Ankyrin repeat domain-containing protein 50.
   
 0.683
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.