Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cog6 | F41C3.4 | A0A0V1L2S0 | A0A0V1LQ91 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Putative Golgi transport protein 1. | 0.499 |
Cog6 | RAB6A | A0A0V1L2S0 | A0A0V1LK57 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Ras-related protein Rab-6A. | 0.908 |
Cog6 | SEC22B | A0A0V1L2S0 | A0A0V1KRB3 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. | 0.533 |
Cog6 | STX5 | A0A0V1L2S0 | A0A0V1L9G8 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Syntaxin-5; Belongs to the syntaxin family. | 0.899 |
Cog6 | Stx16 | A0A0V1L2S0 | A0A0V1LTI4 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | SNARE domain protein. | 0.905 |
Cog6 | T02_706 | A0A0V1L2S0 | A0A0V1L0D9 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. | 0.503 |
Cog6 | T02_8828 | A0A0V1L2S0 | A0A0V1KYB2 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Gelsolin, cytoplasmic. | 0.818 |
Cog6 | VTI1A | A0A0V1L2S0 | A0A0V1LH14 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Vesicle transport through interaction with t-SNAREs-like protein 1A. | 0.886 |
Cog6 | Ykt6 | A0A0V1L2S0 | A0A0V1KX59 | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family. | 0.794 |
F41C3.4 | Cog6 | A0A0V1LQ91 | A0A0V1L2S0 | Putative Golgi transport protein 1. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.499 |
F41C3.4 | SEC22B | A0A0V1LQ91 | A0A0V1KRB3 | Putative Golgi transport protein 1. | Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. | 0.520 |
F41C3.4 | T02_706 | A0A0V1LQ91 | A0A0V1L0D9 | Putative Golgi transport protein 1. | Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. | 0.610 |
F41C3.4 | T02_8828 | A0A0V1LQ91 | A0A0V1KYB2 | Putative Golgi transport protein 1. | Gelsolin, cytoplasmic. | 0.518 |
RAB6A | Cog6 | A0A0V1LK57 | A0A0V1L2S0 | Ras-related protein Rab-6A. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.908 |
RAB6A | SEC22B | A0A0V1LK57 | A0A0V1KRB3 | Ras-related protein Rab-6A. | Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. | 0.461 |
RAB6A | STX5 | A0A0V1LK57 | A0A0V1L9G8 | Ras-related protein Rab-6A. | Syntaxin-5; Belongs to the syntaxin family. | 0.645 |
RAB6A | Stx16 | A0A0V1LK57 | A0A0V1LTI4 | Ras-related protein Rab-6A. | SNARE domain protein. | 0.857 |
RAB6A | T02_706 | A0A0V1LK57 | A0A0V1L0D9 | Ras-related protein Rab-6A. | Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. | 0.511 |
RAB6A | T02_8828 | A0A0V1LK57 | A0A0V1KYB2 | Ras-related protein Rab-6A. | Gelsolin, cytoplasmic. | 0.406 |
RAB6A | VTI1A | A0A0V1LK57 | A0A0V1LH14 | Ras-related protein Rab-6A. | Vesicle transport through interaction with t-SNAREs-like protein 1A. | 0.820 |
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