STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGBP1Immunoglobulin-binding protein 1. (344 aa)    
Predicted Functional Partners:
Mob1b
Serine/threonine-protein phosphatase.
    
 0.999
ppp4cb
Serine/threonine-protein phosphatase.
    
 0.986
Ppx1
Serine/threonine-protein phosphatase.
    
 0.978
tiprl
TIP41-like protein.
   
 0.959
Mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.936
mlst8
Target of rapamycin complex subunit lst8.
    
 0.916
CCT6A
T-complex protein 1 subunit zeta.
    
   0.908
T02_5775
Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family.
   
 0.901
CCT7
T-complex protein 1 subunit eta.
    
 
 0.852
T02_7417
Uncharacterized protein.
     
 0.803
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.