STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slo-1-2Calcium-activated potassium channel slo-1. (1249 aa)    
Predicted Functional Partners:
SK
Small conductance calcium-activated potassium channel protein.
     
 0.732
egl-4
cGMP-dependent protein kinase egl-4.
   
 
 0.666
Ca-alpha1D
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
 0.660
CAC
Voltage-dependent calcium channel type A subunit alpha-1.
   
 0.630
Prkacb
cAMP-dependent protein kinase catalytic subunit beta.
    
 0.590
PRKACA
cAMP-dependent protein kinase catalytic subunit; Belongs to the protein kinase superfamily.
    
 0.590
Prkaca
cAMP-dependent protein kinase catalytic subunit alpha.
    
 0.590
Thap1
THAP domain-containing protein 1.
    
 0.576
CAPK
Cyclin-dependent kinase 11B; Belongs to the protein kinase superfamily.
    
 0.576
SK-2
Small conductance calcium-activated potassium channel protein.
     
 0.555
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.