STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DRG1Developmentally-regulated GTP-binding protein 1. (366 aa)    
Predicted Functional Partners:
Arf72A
Zinc finger CCCH domain-containing protein 15.
   
 
 0.998
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.927
SLC25A4
ADP/ATP translocase 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.910
rpa-0
60S acidic ribosomal protein P0.
  
 
 0.823
Pole2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 
 0.820
cyn-7
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.820
RpL8
60S ribosomal protein L8.
   
 
 0.819
csnk2a1
Casein kinase II subunit alpha.
   
   0.819
cts-1
Citrate synthase; Belongs to the citrate synthase family.
    
   0.817
Mrps7
28S ribosomal protein S7, mitochondrial.
   
 
 0.804
Your Current Organism:
Trichinella nativa
NCBI taxonomy Id: 6335
Other names: T. nativa
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